• #333333
  • #660033
    Aromatic residues facilitate electric current through proteins
  • #cc9900
    DNA turbine in nanopore switches rotation direction in high salt
  • #666666
    Benchmarking Molecular Dynamics Force Fields for All-Atom Simulations of Biological Condensates
  • #339999
    DNA double helix, a tiny electromotor
  • #000000
    Unidirectional single-file transport of full-length proteins through a nanopore
  • #006666
    Toward a physical model of a replisome
  • #993366
    Percolation controls passive transport through nuclear pores
  • #006699
    Resolving isomeric posttranslational modifications using a biological nanopore as a sensor of molecular shape
  • #990099
    Multiple rereads of single protein sequence
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    Self-folding water filter
  • #262cc9
    Infinite-depth sequencing of single nucleic acid molecules
  • #003366
    Mrdna: Multi-resolution DNA modeling package blends speed and accuracy for structure determination
  • #0000cc
    Nanopore recognition of the twenty amino acids
  • #009999
    Predicting energy production of entire photosynthetic organelle from atomic simulations
  • #ff9933
    Artificial water channels enable rapid and selective water transport
  • #00ccff
    Guiding the capture of DNA molecules and proteins
  • #333366
    Outperforming nature: synthetic enzyme built from DNA flips lipids of biological membranes at record rates
  • #ff9900
    Under Pressure: repellant nanopores
  • #000099
    Simulations capture diffusive substeps of a protein moving along ssDNA

Recent publications

Kumar Sarthak, David Winogradoff, Yingda Ge, Sua Myong, and Aleksei Aksimentiev
Journal of Chemical Theory and Computation (2023)
DOI:10.1021/acs.jctc.3c00148  BibTex

Adnan Choudhary, Christopher Maffeo, and Aleksei Aksimentiev
Phys Chem Chem Phys 24(5) 2706-2716 (2022)
DOI:10.1039/d1cp04589j  PMID:35050282  BibTex

Jie Shen, Arundhati Roy, Himanshu Joshi, Laxmicharan Samineni, Ruijuan Ye, Yu-Ming Tu, Woochul Song, Matthew Skiles, Manish Kumar, Aleksei Aksimentiev, and Huaqiang Zeng
Nano Lett 22(12) 4831-4838 (2022)
DOI:10.1021/acs.nanolett.2c01137  PMID:35674810  BibTex

Merle Scherf, Florian Scheffler, Christopher Maffeo, Ulrich Kemper, Jingjing Ye, Aleksei Aksimentiev, Ralf Seidel, and Uta Reibetanz
Nanoscale 14 18041-18050 (2022)
DOI:10.1039/d2nr05356j  BibTex

David Winogradoff, Han-Yi Chou, Christopher Maffeo, and Aleksei Aksimentiev
Nature Communications 13(1) 5138 (2022)
DOI:10.1038/s41467-022-32857-1  PMID:36050301  BibTex

Yi Li, Christopher Maffeo, Himanshu Joshi, Aleksei Aksimentiev, Brice Ménard, and Rebecca Schulman
Science Advances 8(36) (2022)
DOI:10.1126/sciadv.abq4834  BibTex

Tobias Ennslen, Kumar Sarthak, Aleksei Aksimentiev, and Jan C. Behrends
Journal of the American Chemical Society 144(35) 16060-16068 (2022)
DOI:10.1021/jacs.2c06211  BibTex

Prabhat Tripathi, Morgan Chandler, Christopher Michael Maffeo, Ali Fallahi, Amr Makhamreh, Justin Halman, Aleksei Aksimentiev, Kirill A. Afonin, and Meni Wanunu
Nanoscale 14(18) 6866-6875 (2022)
DOI:10.1039/D1NR08002D  BibTex

Christopher Maffeo, Han-Yi Chou, and Aleksei Aksimentiev
iScience 25(5) 104264 (2022)
DOI:10.1016/j.isci.2022.104264  BibTex